BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A06SP1|AL426939
(955 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1395 1274 0.0
>3x_Contig1395
Length = 6688
Score = 1274 bits (639), Expect = 0.0
Identities = 645/651 (99%)
Strand = Plus / Plus
Query: 305 atggtatcacagacttgatgccaagatctcaatcttcacctaccaagaacgtcaaattcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggtatcacagacttgatgccaagatctcaatcttcacctaccaagaacgtcaaattcc 81
Query: 365 aatcacaaggacattctggtaacattcttcgatcacagtctcaactgccgttcggaagag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aatcacaaggacattctggtaacattcttcgatcacagtctcaactgccgttcggaagag 141
Query: 425 atgagcatggaaatagatttwtctcttcagaatccacacgattccactctttgactacwa 484
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 142 atgagcatggaaatagatttatctcttcagaatccacacgattccactctttgactacaa 201
Query: 485 actcaaccacagatcctacgtaccawattacaagcaaacaattagagaagttttaccatg 544
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 202 actcaaccacagatcctacgtaccaaattacaagcaaacaattagagaagttttaccatg 261
Query: 545 aagagaataaatggagcaggaaggtaggtggatggttcattcttggtgataaatctagag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagagaataaatggagcaggaaggtaggtggatggttcattcttggtgataaatctagag 321
Query: 605 acactggttccgcagaccagtcacataccagtttaaatgacaaatcatacatgtacgaaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acactggttccgcagaccagtcacataccagtttaaatgacaaatcatacatgtacgaaa 381
Query: 665 tcaggaatatggttatctcatcagcgcgtaactgattctgaatcagtgtcctgacatgtg 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcaggaatatggttatctcatcagcgcgtaactgattctgaatcagtgtcctgacatgtg 441
Query: 725 tcacctactatagcatttaatttattcagagacaataactatacatataahahatcatct 784
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 442 tcacctactatagcatttaatttattcagagacaataactatacatataaaaaatcatct 501
Query: 785 tttatgatagaacggaataatctctctaacataacatctaggtcattctatgttacaaag 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tttatgatagaacggaataatctctctaacataacatctaggtcattctatgttacaaag 561
Query: 845 cctatcgcactacatattcggcactgatttccttaatatagtccctttaaaaccatcggt 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cctatcgcactacatattcggcactgatttccttaatatagtccctttaaaaccatcggt 621
Query: 905 ttttgttcagaattcgattatagatcacggtcaaagaatctttttatwgga 955
||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 622 ttttgttcagaattcgattatagatcacggtcaaagaatctttttatagga 672
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6469
Number of Sequences: 1807
Number of extensions: 6469
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)